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Algal rhodopsins encoding diverse signal sequence holds potential for expansion of organelle optogenetics: Sequence dataset for analysis

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posted on 2023-02-02, 02:36 authored by KUMARI SUSHMITA, SUNITA SHARMA, MANISH SINGH KAUSHIK, SUNEEL KATERIYA

Rhodopsin sequences were retrieved from the JGI Phycocosm database. Sequence retrieval was performed using reference sequences of well-characterized rhodopsins from the NCBI database. Sequence encoding at least five-transmembrane helices with conserved lysine in the seventh helix were considered further for sequence alignment, phylogenetic analysis, and the presence of cellular targeting signals. 

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skateriya@jnu.ac.in

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2023 THE BIOPHYSICAL SOCIETY OF JAPAN